| chr. | ORF's name | start | stop | length | S1 | S2 | V1 | V2 | D | cod. prob. | YZ score | MIPS | Genol. | T | Wood's annotation | brief ID |
| 3 | TY2A_C | 85101 | 86414 | 438 | -7.59 | -46.40 | 2.89 | 5.54 | 2.25 | 0.78 | 0.60 | 1 | TY2A protein | |||
| 3 | TY2B_C | 85101 | 90411 | 1770 | 11.23 | -41.14 | 6.71 | 8.49 | 1.40 | 0.93 | 0.59 | 1 | TY2B protein | |||
| 3 | YCL001w | 111910 | 112473 | 188 | 101.31 | -161.57 | 1.12 | 1.15 | 3.90 | 0.38 | 0.40 | 1 | 1 | 6 | required for correct localization of Sec12p | |
| 3 | YCL001w-a | 113074 | 113532 | 153 | 28.89 | -41.63 | 2.68 | 0.97 | 1.60 | 0.90 | 0.49 | 3 | 3 | 0 | similarity to Dom34p | |
| 3 | YCL001w-b | 113764 | 114015 | 84 | 29.74 | 0.00 | 3.52 | 1.53 | 1.60 | 0.90 | 4 | 1 | 2 | similarity to S. servazzii | ||
| 3 | YCL002c | 111297 | 110842 | 152 | 123.69 | -162.76 | 1.17 | 2.46 | 4.32 | 0.29 | 0.32 | 4 | 2 | 1 | strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL002c | |
| 3 | YCL004w | 109101 | 110663 | 521 | 33.69 | -69.65 | 1.74 | 2.90 | 1.59 | 0.90 | 0.48 | 1 | 1 | 4 | phosphatidylglycerophosphate synthase | |
| 3 | YCL005w | 108017 | 108784 | 256 | 16.39 | -142.77 | 2.22 | 1.96 | 2.77 | 0.67 | 0.56 | 4 | 2 | 0 | strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL005w | |
| 3 | YCL007c | 107362 | 106973 | 130 | -6.34 | 25.35 | 2.38 | 1.84 | 2.96 | 0.62 | 0.46 | 1 | 3 | 0 | affects the mannoprotein layer of the cell wall | |
| 3 | YCL008c | 106849 | 105962 | 296 | -16.50 | -80.91 | 3.27 | 2.94 | 2.62 | 0.70 | 0.63 | 1 | 3 | 0 | required for vacuolar targeting of temperature-sensitive plasma membrane proteins, Ste2p and Can1p | |
| 3 | YCL009c | 105543 | 104617 | 309 | 58.11 | -95.36 | 3.02 | 1.83 | 1.48 | 0.92 | 0.61 | 1 | 1 | 6 | acetolactate synthase, regulatory subunit | |
| 3 | YCL010c | 104345 | 103569 | 259 | 53.34 | -20.14 | 3.33 | 1.99 | 1.05 | 0.97 | 0.66 | 4 | 1 | 4 | strong similarity to Saccharomyces pastorianus hypothetical protein LgYCL010c | |
| 3 | YCL011c | 103353 | 102073 | 427 | 60.39 | 42.22 | 5.29 | 3.53 | 2.16 | 0.80 | 0.61 | 1 | 1 | 1 | potential telomere-associated protein | |
| 3 | YCL014w | 96280 | 101187 | 1636 | 43.52 | -40.52 | 8.11 | 7.15 | 0.25 | 1.00 | 0.62 | 1 | 2 | 4 | budding protein | |
| 3 | YCL016c | 95762 | 94623 | 380 | 25.02 | -64.29 | 2.55 | 1.54 | 1.56 | 0.91 | 0.59 | 1 | 2 | 3 | part of an alternative RFC complex | |
| 3 | YCL017c | 94269 | 92779 | 497 | 63.43 | -74.83 | 5.32 | 2.74 | 0.87 | 0.98 | 0.68 | 1 | 1 | 4 | regulates Iron-Sulfur cluster proteins, cellular Iron uptake, andIron distribution | |
| 3 | YCL018w | 91323 | 92414 | 364 | 70.43 | -93.65 | 5.01 | 2.47 | 1.39 | 0.93 | 0.74 | 1 | 1 | 8 | beta-isopropyl-malate dehydrogenase | |
| 3 | YCL021w-a | 83619 | 83993 | 125 | 51.34 | -124.99 | 0.57 | 1.09 | 2.92 | 0.63 | 5 | very hypoth. | hypothetical protein | |||
| 3 | YCL023c | 79295 | 78951 | 115 | -7.13 | 168.11 | 0.75 | 1.81 | 4.41 | 0.27 | 0.41 | 6 | 2 | 1 | spurious | questionable ORF |
| 3 | YCL024w | 79161 | 82271 | 1037 | 23.86 | -35.59 | 6.76 | 4.16 | 0.95 | 0.97 | 0.61 | 1 | 1 | 4 | kinase coordinate cell cycle progression with the organization of the peripheralcytoskeleton | |
| 3 | YCL025c | 77918 | 76134 | 595 | 85.88 | -132.27 | 4.56 | 3.05 | 2.41 | 0.75 | 0.60 | 1 | 1 | 8 | asparagine and glutamine permease | |
| 3 | YCL026c-a | 75285 | 74707 | 193 | 56.73 | -78.37 | 2.76 | 2.50 | 1.17 | 0.96 | 0.70 | 1 | 2 | 4 | involved in fatty acid regulation | |
| 3 | YCL026c-b | 73986 | 73408 | 193 | 56.66 | -75.32 | 3.27 | 3.13 | 0.89 | 0.98 | 2 | strong similarity to FRM2 | ||||
| 3 | YCL027w | 71803 | 73338 | 512 | 11.31 | -55.01 | 3.38 | 4.32 | 1.47 | 0.92 | 0.56 | 1 | 2 | 2 | cell fusion protein | |
| 3 | YCL028w | 70150 | 71364 | 405 | 79.38 | -9.15 | 0.81 | 5.94 | 2.50 | 0.73 | 0.58 | 1 | 2 | 1 | prion, epigenetic modifier of protein function | |
| 3 | YCL029c | 69921 | 68602 | 440 | 12.53 | -15.87 | 3.52 | 4.71 | 1.60 | 0.90 | 0.61 | 1 | 1 | 4 | nuclear fusion protein | |
| 3 | YCL030c | 68333 | 65937 | 799 | 68.49 | -58.91 | 6.46 | 2.81 | 0.86 | 0.98 | 0.73 | 1 | 1 | 7 | phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase/histidinol dehydrogenase | |
| 3 | YCL031c | 65568 | 64678 | 297 | 39.52 | -34.90 | 3.01 | 3.04 | 0.83 | 0.98 | 0.60 | 1 | 1 | 7 | involved in pre-rRNA processing and ribosome assembly | |
| 3 | YCL032w | 63441 | 64478 | 346 | 40.82 | -36.38 | 3.13 | 2.54 | 0.79 | 0.98 | 0.59 | 1 | 2 | 6 | pheromone response pathway protein | |
| 3 | YCL033c | 63282 | 62779 | 168 | 47.86 | 16.70 | 2.18 | 1.61 | 2.07 | 0.82 | 0.54 | 3 | 1 | 3 | similarity to M.capricolum transcription repressor | |
| 3 | YCL034w | 61658 | 62719 | 354 | 42.46 | -17.74 | 3.39 | 2.79 | 0.90 | 0.98 | 0.65 | 4 | 2 | 5 | similarity to hypothetical S.pombe protein | |
| 3 | YCL035c | 61173 | 60844 | 110 | 54.46 | -39.29 | 2.46 | 1.36 | 1.41 | 0.93 | 0.72 | 1 | 1 | 3 | glutaredoxin | |
| 3 | YCL036w | 59026 | 60723 | 566 | 44.27 | 16.82 | 4.64 | 1.89 | 1.64 | 0.90 | 0.59 | 4 | 2 | 3 | similarity to hypothetical protein YDR514c | |
| 3 | YCL037c | 58774 | 57377 | 466 | 25.50 | -41.92 | 3.34 | 6.10 | 1.00 | 0.97 | 0.69 | 1 | 1 | 0 | La motif-containing proteins that modulate mRNA translation | |
| 3 | YCL038c | 56527 | 54944 | 528 | 78.69 | -167.68 | 3.11 | 3.88 | 3.04 | 0.60 | 0.50 | 4 | 1 | 5 | similarity to bacterial membrane transporter | |
| 3 | YCL039w | 52645 | 54879 | 745 | 25.39 | -65.70 | 2.39 | 3.74 | 1.40 | 0.93 | 0.59 | 3 | 1 | 4 | similarity to Tup1p general repressor of RNA polymerase II transcription | |
| 3 | YCL040w | 50838 | 52337 | 500 | 69.70 | -79.59 | 3.48 | 2.23 | 1.27 | 0.95 | 0.64 | 1 | 1 | 6 | aldohexose specific glucokinase | |
| 3 | YCL041c | 50627 | 50136 | 164 | -153.43 | -177.88 | 1.40 | 2.11 | 7.03 | 0.00 | 0.31 | 6 | 0 | 0 | spurious | questionable ORF |
| 3 | YCL042w | 50584 | 50940 | 119 | -32.28 | -78.31 | 2.06 | 2.71 | 3.38 | 0.51 | 0.46 | 6 | 0 | 0 | spurious | questionable ORF |
| 3 | YCL043c | 50221 | 48656 | 522 | 89.60 | -53.00 | 6.26 | 4.00 | 1.64 | 0.90 | 0.78 | 1 | 1 | 7 | protein disulfide-isomerase precursor | |
| 3 | YCL044c | 48364 | 47114 | 417 | -5.81 | -79.26 | 2.90 | 2.89 | 2.29 | 0.78 | 0.58 | 4 | 2 | 3 | similarity to hypothetical protein K. lactis | |
| 3 | YCL045c | 46905 | 44626 | 760 | 45.73 | -72.41 | 4.00 | 3.12 | 0.54 | 0.99 | 0.62 | 4 | 1 | 6 | spurious | weak similarity to human ORF |
| 3 | YCL046w | 46640 | 46960 | 107 | 46.40 | -53.13 | 2.80 | 0.48 | 1.61 | 0.90 | 0.59 | 6 | 2 | 1 | questionable ORF | |
| 3 | YCL047c | 44437 | 43664 | 258 | 63.43 | -57.53 | 1.11 | 0.81 | 2.26 | 0.78 | 0.53 | 4 | 2 | 4 | similarity to hypothetical protein SPAC694.03 S. pombe | |
| 3 | YCL048w | 42165 | 43553 | 463 | 39.06 | -80.13 | 4.13 | 1.08 | 1.30 | 0.94 | 0.58 | 2 | 2 | 4 | strong similarity to sporulation-specific protein Sps2p | |
| 3 | YCL049c | 40724 | 39789 | 312 | 71.57 | -45.00 | 3.22 | 2.24 | 1.19 | 0.95 | 0.64 | 4 | 2 | 1 | similarity to 'unknown protein'; S. pastorianus | |
| 3 | YCL050c | 38801 | 37839 | 321 | 49.69 | -52.22 | 2.42 | 2.82 | 1.06 | 0.97 | 0.61 | 1 | 1 | 2 | ATP adenylyltransferase I | |
| 3 | YCL051w | 35865 | 37613 | 583 | 23.28 | -38.27 | 3.88 | 4.75 | 0.98 | 0.97 | 0.62 | 1 | 3 | 0 | involved in laminarinase resistance | |
| 3 | YCL052c | 35393 | 34146 | 416 | 54.46 | -39.56 | 2.95 | 1.46 | 1.18 | 0.95 | 0.57 | 1 | 2 | 1 | required for post-translational processing of the protease B precursor Prb1p | |
| 3 | YCL054w | 31449 | 33971 | 841 | 48.79 | -11.24 | 9.21 | 5.66 | 0.88 | 0.98 | 0.73 | 1 | 1 | 8 | required for ribosome synthesis, putative methylase | |
| 3 | YCL055w | 27929 | 28933 | 335 | 17.53 | -37.75 | 3.27 | 2.14 | 1.38 | 0.93 | 0.56 | 1 | 1 | 6 | regulatory protein required for pheromone induction of karyogamy genes | |
| 3 | YCL056c | 27359 | 26928 | 144 | 50.71 | 129.81 | 2.37 | 1.30 | 4.35 | 0.28 | 0.42 | 5 | 3 | 0 | hypothetical protein | |
| 3 | YCL057c-a | 24325 | 24035 | 97 | 67.17 | -147.99 | 2.09 | 0.96 | 2.91 | 0.63 | 0.29 | 4 | 1 | 2 | strong similarity to hypothetical protein S.pombe | |
| 3 | YCL057w | 24768 | 26903 | 712 | 67.29 | -42.65 | 3.49 | 3.87 | 0.90 | 0.98 | 0.62 | 1 | 1 | 5 | proteinase yscD | |
| 3 | YCL058c | 23981 | 23526 | 152 | 177.51 | -154.36 | 1.87 | 4.50 | 5.74 | 0.03 | 0.33 | 5 | 3 | 0 | hypothetical protein | |
| 3 | YCL059c | 23379 | 22432 | 316 | 36.74 | -15.02 | 4.98 | 2.39 | 0.95 | 0.97 | 0.64 | 2 | 1 | 5 | strong similarity to fission yeast rev interacting protein mis3 | |
| 3 | YCL061c | 22106 | 18819 | 1096 | 32.20 | -18.43 | 9.64 | 8.60 | 0.92 | 0.98 | 0.72 | 3 | 2 | 3 | similarity to URK1 | |
| 3 | YCL063w | 17290 | 18558 | 423 | 10.54 | -50.76 | 2.13 | 3.77 | 1.86 | 0.86 | 0.55 | 3 | 2 | 1 | weak similarity to yeast translation regulator Gcd6p | |
| 3 | YCL064c | 16880 | 15801 | 360 | 49.33 | -78.69 | 4.93 | 1.07 | 1.26 | 0.95 | 0.65 | 1 | 1 | 5 | L-serine/L-threonine deaminase | |
| 3 | YCL065w | 13751 | 14116 | 122 | -101.31 | -177.88 | 0.46 | 2.45 | 6.80 | 0.00 | 0.34 | 4 | 0 | 0 | strong similarity to probable membrane protein YCR041w | |
| 3 | YCL066w | 13282 | 13806 | 175 | 55.01 | -39.47 | 0.92 | 1.66 | 2.08 | 0.82 | 0.52 | 1 | 2 | 1 | mating type regulatory protein, silenced copy at HML | |
| 3 | YCL067c | 13018 | 12389 | 210 | 12.34 | -19.98 | 4.52 | 1.62 | 1.69 | 0.89 | 0.55 | 1 | 2 | 3 | mating type regulatory protein, silenced copy at HML | |
| 3 | YCL068c | 12285 | 11506 | 260 | -10.18 | -111.04 | 2.46 | 0.86 | 3.05 | 0.60 | 0.54 | 2 | 3 | 0 | strong similarity to Bud5p; putative pseudogene | |
| 3 | YCL069w | 9706 | 11079 | 458 | 53.30 | -168.18 | 3.21 | 4.11 | 2.79 | 0.66 | 0.53 | 2 | 1 | 2 | strong similarity to drug resistance protein SGE1 | |
| 3 | YCL073c | 8326 | 6482 | 615 | 75.60 | -138.37 | 3.08 | 3.40 | 2.41 | 0.75 | 0.51 | 2 | 1 | 9 | strong similarity to subtelomeric encoded proteins | |
| 3 | YCL074w | 2824 | 3747 | 308 | 41.42 | -73.44 | 1.29 | 2.20 | 1.85 | 0.86 | 0.61 | 5 | spurious | hypothetical protein - putative pseudo-TY5 | ||
| 3 | YCL075w | 2126 | 2563 | 146 | 61.70 | -110.56 | 1.22 | 1.41 | 2.46 | 0.74 | 0.50 | 5 | spurious | hypothetical protein - putative pseudo-TY5 | ||
| 3 | YCL076w | 1392 | 2132 | 247 | 49.69 | -34.59 | 2.75 | 2.24 | 1.02 | 0.97 | 0.60 | 5 | spurious | hypothetical protein - putative pseudo-TY5 | ||
| 3 | YCR001w | 115679 | 115990 | 104 | -158.20 | -153.43 | 1.06 | 1.32 | 6.74 | 0.00 | 0.29 | 3 | 1 | 0 | weak similarity to chloride channel proteins | |
| 3 | YCR002c | 118342 | 117377 | 322 | 42.46 | -55.01 | 3.55 | 1.36 | 1.01 | 0.97 | 0.64 | 1 | 1 | 4 | cell division control protein | |
| 3 | YCR003w | 118614 | 119162 | 183 | -5.71 | 0.00 | 2.23 | 2.59 | 2.61 | 0.70 | 0.53 | 1 | 2 | 2 | ribosomal protein YmL32, mitochondrial | |
| 3 | YCR004c | 120312 | 119572 | 247 | 69.73 | -65.90 | 4.41 | 2.65 | 0.97 | 0.97 | 0.73 | 2 | 1 | 4 | strong similarity to S. pombe protein obr1 | |
| 3 | YCR005c | 122322 | 120943 | 460 | 78.69 | -53.13 | 3.33 | 2.33 | 1.38 | 0.93 | 0.63 | 1 | 1 | 5 | citrate (si)-synthase, peroxisomal | |
| 3 | YCR006c | 122997 | 122527 | 157 | 0.00 | 126.87 | 1.04 | 1.20 | 4.90 | 0.17 | 0.41 | 5 | 3 | 0 | very hypoth. | hypothetical protein |
| 3 | YCR007c | 126724 | 126008 | 239 | 75.62 | -78.23 | 2.60 | 1.59 | 1.77 | 0.88 | 0.59 | 4 | 2 | 1 | strong similarity to subtelomeric encoded proteins | |
| 3 | YCR008w | 128464 | 130272 | 603 | 41.19 | -39.97 | 4.76 | 3.61 | 0.32 | 1.00 | 0.61 | 1 | 1 | 6 | serine/threonine-specific protein kinase | |
| 3 | YCR009c | 131536 | 130742 | 265 | 57.89 | -17.97 | 3.70 | 2.39 | 0.95 | 0.97 | 0.66 | 3 | 1 | 8 | similarity to human amphiphysin and Rvs167p | |
| 3 | YCR010c | 133118 | 132270 | 283 | 101.80 | -138.65 | 4.07 | 1.98 | 2.99 | 0.61 | 0.60 | 2 | 1 | 8 | strong similarity to Y.lipolytica GPR1 protein and Fun34p | |
| 3 | YCR011c | 136867 | 133721 | 1049 | 65.64 | -147.72 | 5.39 | 0.69 | 2.68 | 0.69 | 0.54 | 1 | 1 | 8 | ATP-dependent permease | |
| 3 | YCR012w | 137740 | 138987 | 416 | 82.10 | -79.16 | 6.78 | 2.35 | 1.55 | 0.91 | 0.77 | 1 | 1 | 6 | phosphoglycerate kinase | |
| 3 | YCR013c | 139043 | 138399 | 215 | 80.91 | -103.36 | 1.73 | 5.61 | 2.30 | 0.77 | 0.56 | 3 | 1 | 6 | spurious | similarity to M.leprae B1496_F1_41 protein |
| 3 | YCR014c | 140927 | 139182 | 582 | 56.31 | 10.67 | 4.78 | 2.91 | 1.43 | 0.93 | 0.55 | 1 | 1 | 5 | DNA polymerase | |
| 3 | YCR015c | 142164 | 141214 | 317 | 48.81 | -11.69 | 2.99 | 1.66 | 1.35 | 0.94 | 0.54 | 5 | 2 | 3 | hypothetical protein | |
| 3 | YCR016w | 143628 | 144497 | 290 | 37.48 | -3.09 | 4.44 | 4.35 | 1.13 | 0.96 | 0.63 | 5 | 2 | 4 | hypothetical protein | |
| 3 | YCR017c | 147628 | 144770 | 953 | 84.11 | -138.46 | 4.10 | 3.42 | 2.49 | 0.73 | 0.55 | 4 | 1 | 7 | similarity to hypothetical S.pombe protein | |
| 3 | YCR018c | 148897 | 148235 | 221 | 21.96 | 7.39 | 4.50 | 3.66 | 1.63 | 0.90 | 0.55 | 1 | 2 | 0 | nucleolar protein | |
| 3 | YCR018c-a | 151856 | 151605 | 84 | 45.00 | -135.00 | 0.62 | 1.85 | 2.93 | 0.63 | 0.25 | 6 | spurious | questionable ORF - identified by SAGE | ||
| 3 | YCR019w | 152831 | 153919 | 363 | 48.89 | 41.99 | 3.83 | 0.71 | 2.46 | 0.74 | 0.55 | 1 | 2 | 6 | necessary for structural stability of L-A dsRNA-containing particles | |
| 3 | YCR020c | 154653 | 154009 | 215 | 93.27 | -43.26 | 2.39 | 1.59 | 2.22 | 0.79 | 0.56 | 3 | 1 | 3 | similarity to regulatory protein | |
| 3 | YCR020c-a | 155090 | 154827 | 88 | 38.66 | -176.63 | 2.73 | 1.82 | 3.13 | 0.58 | 0.68 | 1 | 2 | 1 | involved in stability of L-A dsRNA-containing particles | |
| 3 | YCR020w-b | 155314 | 155547 | 78 | 12.99 | -5.19 | 3.02 | 1.25 | 2.04 | 0.83 | 4 | 2 | 1 | similarity to S. bayanus | ||
| 3 | YCR021c | 157099 | 156104 | 332 | 100.30 | -152.10 | 3.68 | 2.11 | 3.17 | 0.56 | 0.56 | 1 | 1 | 4 | heat shock protein | |
| 3 | YCR022c | 157757 | 157416 | 114 | -142.59 | -170.54 | 2.00 | 1.14 | 7.32 | 0.00 | 0.21 | 5 | 2 | 1 | very hypoth. | hypothetical protein |
| 3 | YCR023c | 160365 | 158533 | 611 | 65.88 | -151.78 | 2.97 | 1.88 | 2.63 | 0.70 | 0.52 | 3 | 1 | 3 | weak similarity to E.coli tetracycline resistance protein TCR1 | |
| 3 | YCR024c | 162214 | 160739 | 492 | 47.49 | -61.39 | 1.47 | 2.26 | 1.66 | 0.89 | 0.49 | 1 | 1 | 8 | asn-tRNA synthetase, mitochondrial | |
| 3 | YCR024c-a | 163059 | 162940 | 40 | 54.46 | 167.01 | 1.36 | 2.11 | 3.72 | 0.43 | 0.40 | 1 | 2 | 1 | H+-ATPase subunit, plasma membrane | |
| 3 | YCR025c | 163848 | 163441 | 136 | -71.57 | -45.00 | 1.90 | 0.61 | 4.95 | 0.16 | 0.33 | 5 | 2 | 1 | very hypoth. | hypothetical protein |
| 3 | YCR026c | 166331 | 164106 | 742 | 51.04 | -31.61 | 5.43 | 3.36 | 0.44 | 1.00 | 0.66 | 3 | 1 | 2 | similarity to human autotaxin precursor | |
| 3 | YCR027c | 167991 | 167365 | 209 | 37.97 | -63.43 | 3.60 | 0.46 | 1.52 | 0.92 | 0.64 | 1 | 1 | 2 | rheb-like Gene involved in growth regulation | |
| 3 | YCR028c | 172416 | 170881 | 512 | 81.10 | -165.14 | 3.71 | 2.24 | 3.00 | 0.61 | 0.52 | 1 | 1 | 5 | high affinity H+/pantothenate symporter | |
| 3 | YCR028c-a | 173432 | 172945 | 135 | 64.23 | -32.28 | 2.77 | 1.93 | 1.28 | 0.94 | 0.73 | 1 | 1 | 4 | ssDNA-binding protein, mitochondrial | |
| 3 | YCR030c | 176430 | 173821 | 870 | 25.74 | -61.70 | 4.22 | 6.01 | 0.87 | 0.98 | 0.63 | 4 | 1 | 3 | weak similarity to S.pombe hypothetical protein SPBC4C3.06 | |
| 3 | YCR031c | 178212 | 177495 | 137 | 61.93 | -90.00 | 4.36 | 0.94 | 1.57 | 0.91 | 0.78 | 1 | 1 | 1 | 40S Ribosomal protein S14.e | |
| 3 | YCR032w | 179512 | 186012 | 2167 | 41.24 | -61.21 | 6.71 | 2.23 | 0.56 | 0.99 | 0.54 | 3 | 1 | 7 | similarity to human beige-like protein and mouse lysosomal trafficking regulator | |
| 3 | YCR033w | 186481 | 190158 | 1226 | 24.06 | -33.69 | 7.01 | 7.83 | 0.96 | 0.97 | 0.63 | 3 | 2 | 5 | similarity to nuclear receptor co-repressor N-Cor | |
| 3 | YCR034w | 190584 | 191624 | 347 | 112.93 | -144.32 | 1.52 | 2.58 | 3.70 | 0.43 | 0.49 | 1 | 1 | 6 | fatty acid elongase required for sphingolipid formation | |
| 3 | YCR035c | 193010 | 191829 | 394 | 56.74 | -74.48 | 5.60 | 1.88 | 0.92 | 0.98 | 0.63 | 1 | 2 | 4 | rRNA processing protein | |
| 3 | YCR036w | 193289 | 194287 | 333 | 52.87 | -28.07 | 4.81 | 0.93 | 1.26 | 0.95 | 0.68 | 1 | 1 | 5 | ribokinase | |
| 3 | YCR037c | 197177 | 194409 | 923 | 61.25 | -117.30 | 5.41 | 3.44 | 1.65 | 0.90 | 0.58 | 1 | 1 | 7 | member of the phosphate permease family | |
| 3 | YCR038c | 199541 | 197616 | 642 | 2.86 | -60.95 | 3.16 | 2.44 | 1.86 | 0.86 | 0.55 | 1 | 1 | 2 | GDP/GTP exchange factor for Rsr1p/Bud1p | |
| 3 | YCR038w-a | 199285 | 199407 | 41 | 21.80 | 172.87 | 0.84 | 1.26 | 3.95 | 0.37 | 4 | 2 | 1 | similarity to S. bayanus | ||
| 3 | YCR039c | 200170 | 199541 | 210 | 12.34 | -19.98 | 4.52 | 1.62 | 1.69 | 0.89 | 0.55 | 1 | 2 | 3 | mating type regulatory protein, expressed copy at MAT locus | |
| 3 | YCR040w | 200434 | 200958 | 175 | 55.01 | -39.47 | 0.92 | 1.66 | 2.08 | 0.82 | 0.52 | 1 | 2 | 1 | mating type regulatory protein, expressed copy at MAT locus | |
| 3 | YCR041w | 200903 | 201232 | 110 | 45.00 | -173.66 | 0.13 | 2.59 | 3.70 | 0.43 | 0.40 | 6 | 2 | 1 | spurious | questionable ORF |
| 3 | YCR042c | 205389 | 201169 | 1407 | 47.29 | -19.20 | 8.02 | 3.16 | 0.69 | 0.99 | 0.62 | 1 | 1 | 8 | component of TFIID complex | |
| 3 | YCR043c | 206636 | 206256 | 127 | 84.56 | 65.22 | 1.87 | 1.27 | 3.43 | 0.50 | 0.48 | 5 | 2 | 1 | very hypoth. | hypothetical protein |
| 3 | YCR044c | 207942 | 206872 | 357 | 98.43 | -168.23 | 1.44 | 1.30 | 3.84 | 0.40 | 0.44 | 1 | 1 | 4 | involved in manganese homeostasis | |
| 3 | YCR045c | 209602 | 208130 | 491 | 57.93 | -42.27 | 4.42 | 2.01 | 0.71 | 0.99 | 0.66 | 3 | 1 | 7 | similarity to serin proteases | |
| 3 | YCR046c | 210415 | 209909 | 169 | 26.57 | -99.46 | 2.24 | 0.47 | 2.28 | 0.78 | 0.53 | 1 | 2 | 2 | ribosomal protein, mitochondrial | |
| 3 | YCR047c | 211537 | 210713 | 275 | 45.76 | 17.65 | 3.20 | 1.39 | 1.87 | 0.86 | 0.59 | 3 | 1 | 2 | weak similarity to N-methyltransferases | |
| 3 | YCR048w | 211921 | 213750 | 610 | 73.61 | -133.45 | 2.15 | 2.12 | 2.53 | 0.72 | 0.51 | 1 | 1 | 4 | acyl-CoA sterol acyltransferase | |
| 3 | YCR049c | 212309 | 211866 | 148 | 131.99 | -119.05 | 2.21 | 1.69 | 3.89 | 0.39 | 0.42 | 6 | 0 | 0 | spurious | questionable ORF |
| 3 | YCR050c | 213764 | 213459 | 102 | 8.75 | -90.00 | 2.60 | 0.40 | 2.44 | 0.74 | 0.56 | 6 | 0 | 0 | spurious | questionable ORF |
| 3 | YCR051w | 214063 | 214728 | 222 | 62.42 | 3.37 | 5.07 | 2.29 | 1.41 | 0.93 | 0.78 | 3 | 2 | 5 | weak similarity to ankyrins | |
| 3 | YCR052w | 214986 | 216434 | 483 | 34.16 | -29.12 | 4.62 | 4.11 | 0.68 | 0.99 | 0.70 | 1 | 2 | 1 | subunit of the RSC complex | |
| 3 | YCR053w | 216689 | 218230 | 514 | 69.33 | -66.80 | 5.00 | 3.70 | 0.94 | 0.97 | 0.69 | 1 | 1 | 6 | threonine synthase (o-p-homoserine p-lyase) | |
| 3 | YCR054c | 220059 | 218371 | 563 | 54.54 | -55.01 | 3.41 | 1.54 | 0.98 | 0.97 | 0.58 | 3 | 1 | 3 | weak similarity to Thr4p | |
| 3 | YCR057c | 223220 | 220452 | 923 | 72.01 | -52.56 | 6.71 | 2.65 | 0.98 | 0.97 | 0.65 | 1 | 1 | 4 | periodic tryptophan protein | |
| 3 | YCR059c | 224222 | 223449 | 258 | 73.61 | -67.25 | 3.31 | 2.09 | 1.32 | 0.94 | 0.75 | 3 | 1 | 3 | weak similarity to hypothetical protein YDL177c | |
| 3 | YCR060w | 224391 | 224723 | 111 | 39.81 | -17.35 | 0.74 | 1.59 | 2.29 | 0.78 | 0.62 | 3 | 1 | 0 | similarity to stress inducible protein Sti1p | |
| 3 | YCR061w | 225555 | 227447 | 631 | 75.96 | -126.06 | 1.81 | 4.53 | 2.50 | 0.73 | 0.59 | 3 | 2 | 4 | similarity to YTP1 | |
| 3 | YCR063w | 228310 | 228780 | 157 | 5.44 | 3.69 | 1.68 | 2.48 | 2.51 | 0.73 | 0.49 | 2 | 1 | 2 | strong similarity to Xenopus G10 and human edg-2 protein | |
| 3 | YCR064c | 228497 | 228090 | 136 | 125.54 | 155.22 | 1.48 | 2.46 | 4.94 | 0.16 | 0.37 | 6 | 0 | 0 | spurious | questionable ORF |
| 3 | YCR065w | 229302 | 230993 | 564 | 13.39 | -42.85 | 2.73 | 4.77 | 1.57 | 0.91 | 0.56 | 1 | 1 | 4 | transcription factor | |
| 3 | YCR066w | 231492 | 232952 | 487 | 19.98 | -28.47 | 3.71 | 3.04 | 1.19 | 0.95 | 0.54 | 1 | 1 | 6 | DNA repair protein | |
| 3 | YCR067c | 236314 | 233120 | 1065 | 66.10 | -89.59 | 6.20 | 8.61 | 1.17 | 0.96 | 0.67 | 1 | 2 | 2 | protein of the endoplasmic reticulum | |
| 3 | YCR068w | 237206 | 238765 | 520 | 71.15 | -45.00 | 3.80 | 1.43 | 1.30 | 0.94 | 0.58 | 3 | 2 | 2 | similarity to starvation induced pSI-7 protein of C. fluvum | |
| 3 | YCR069w | 239047 | 240000 | 318 | 57.53 | -59.47 | 2.92 | 2.54 | 0.92 | 0.98 | 0.68 | 1 | 1 | 3 | peptidyl-prolyl cis-trans isomerase precursor | |
| 3 | YCR071c | 240535 | 240098 | 146 | 27.76 | -36.87 | 3.55 | 0.83 | 1.49 | 0.92 | 0.55 | 1 | 2 | 2 | required for Integrity of Mitochondrial Genome | |
| 3 | YCR072c | 242344 | 240800 | 515 | 49.73 | -42.18 | 4.16 | 1.90 | 0.64 | 0.99 | 0.59 | 2 | 1 | 8 | strong similarity to S. pombe trp-asp repeat containing protein | |
| 3 | YCR073c | 246576 | 242584 | 1331 | 45.17 | -50.56 | 6.38 | 2.20 | 0.45 | 1.00 | 0.58 | 1 | 1 | 7 | MAP kinase kinase kinase | |
| 3 | YCR073w-a | 246956 | 247900 | 315 | 53.13 | -51.84 | 4.23 | 1.00 | 1.12 | 0.96 | 0.69 | 1 | 1 | 3 | multicopy suppressor of los1-1 | |
| 3 | YCR075c | 248808 | 248029 | 260 | 135.00 | -160.56 | 0.79 | 2.24 | 4.70 | 0.21 | 0.40 | 1 | 1 | 3 | intracellular protein transport protein | |
| 3 | YCR076c | 250038 | 249289 | 250 | 56.31 | -39.81 | 2.74 | 0.99 | 1.46 | 0.92 | 0.61 | 3 | 3 | 0 | weak similarity to latent transforming growth factor beta binding protein 3' H. sapiens | |
| 3 | YCR077c | 252621 | 250234 | 796 | 27.73 | -58.65 | 3.88 | 3.61 | 0.80 | 0.98 | 0.62 | 1 | 2 | 5 | topoisomerase II-associated protein | |
| 3 | YCR079w | 252838 | 254163 | 442 | 48.99 | -28.74 | 2.90 | 1.68 | 1.16 | 0.96 | 0.59 | 3 | 2 | 2 | weak similarity to A.thaliana protein phosphatase 2C | |
| 3 | YCR081w | 254364 | 258644 | 1427 | 28.05 | -68.12 | 4.56 | 3.48 | 0.85 | 0.98 | 0.54 | 1 | 1 | 4 | DNA-directed RNA polymerase II holoenzyme and Srb10 CDK subcomplex subunit | |
| 3 | YCR082w | 258876 | 259259 | 128 | 32.91 | -18.43 | 1.79 | 1.68 | 1.82 | 0.87 | 0.66 | 3 | 2 | 2 | weak similarity to Rbk1p | |
| 3 | YCR083w | 259571 | 259951 | 127 | 29.25 | -102.53 | 2.54 | 0.82 | 2.08 | 0.82 | 0.60 | 1 | 1 | 1 | mitochondrial thioredoxin | |
| 3 | YCR084c | 262445 | 260307 | 713 | 39.42 | -54.42 | 3.54 | 6.31 | 0.51 | 0.99 | 0.69 | 1 | 1 | 6 | general transcription repressor | |
| 3 | YCR085w | 262909 | 263259 | 117 | 90.00 | -152.24 | 0.65 | 1.98 | 3.58 | 0.46 | 0.49 | 5 | 3 | 0 | very hypoth. | hypothetical protein |
| 3 | YCR086w | 263385 | 263954 | 190 | 48.81 | -35.54 | 1.54 | 3.12 | 1.58 | 0.91 | 0.65 | 1 | 2 | 5 | involved in nuclear migration | |
| 3 | YCR087c-a | 264460 | 264002 | 153 | 23.81 | -10.30 | 3.00 | 4.52 | 1.46 | 0.92 | 0.15 | 3 | 1 | 4 | similarity to S. pombe SPBC215.06c putative nucleic acid-binding protein | |
| 3 | YCR087w | 263969 | 264481 | 171 | -72.03 | 173.35 | 2.97 | 4.62 | 5.61 | 0.05 | 0.39 | 6 | 0 | 0 | spurious | questionable ORF |
| 3 | YCR088w | 265061 | 266836 | 592 | 61.46 | -42.92 | 5.33 | 8.03 | 0.57 | 0.99 | 0.81 | 1 | 2 | 3 | actin-binding protein | |
| 3 | YCR089w | 267427 | 272253 | 1609 | 69.22 | -94.63 | 3.65 | 15.43 | 1.38 | 0.93 | 0.54 | 1 | 3 | 0 | required for efficient mating | |
| 3 | YCR090c | 272856 | 272311 | 182 | 79.82 | -40.91 | 2.94 | 1.47 | 1.70 | 0.89 | 0.58 | 4 | 2 | 2 | similarity to S. pombe SPBC2D10.03c | |
| 3 | YCR091w | 274397 | 276556 | 720 | 22.81 | -35.54 | 4.33 | 3.53 | 0.99 | 0.97 | 0.56 | 1 | 1 | 3 | ser/thr protein kinase | |
| 3 | YCR092c | 279900 | 276760 | 1047 | 41.83 | -53.41 | 5.93 | 2.54 | 0.34 | 1.00 | 0.60 | 1 | 1 | 8 | DNA mismatch repair protein | |
| 3 | YCR093w | 280110 | 286433 | 2108 | 43.45 | -95.03 | 5.70 | 5.47 | 1.05 | 0.97 | 0.58 | 1 | 1 | 8 | nuclear protein | |
| 3 | YCR094w | 286755 | 287927 | 391 | 27.68 | -42.18 | 3.48 | 2.18 | 0.99 | 0.97 | 0.59 | 1 | 1 | 7 | cell division cycle mutant | |
| 3 | YCR095c | 289251 | 288166 | 362 | 48.18 | -31.87 | 4.02 | 2.29 | 0.58 | 0.99 | 0.59 | 4 | 2 | 5 | similarity to Saccharomyces kluyveri strain NRRL Y-12651 | |
| 3 | YCR096c | 293531 | 293175 | 119 | 11.04 | 3.18 | 3.83 | 1.65 | 2.00 | 0.83 | 0.55 | 1 | 2 | 2 | mating type regulatory protein, silenced copy at HMR locus | |
| 3 | YCR097w | 293828 | 294311 | 126 | 8.53 | -3.37 | 3.60 | 1.52 | 2.03 | 0.83 | 0.54 | 1 | 1 | 2 | mating type regulatory protein, silenced copy at HMR locus | |
| 3 | YCR097w-a | 294432 | 294695 | 88 | -135.00 | 175.24 | 0.15 | 2.57 | 7.89 | 0.00 | 4 | 2 | 1 | similarity to S. bayanus | ||
| 3 | YCR098c | 298598 | 297045 | 518 | 60.40 | -172.87 | 6.32 | 2.13 | 2.91 | 0.63 | 0.60 | 1 | 1 | 3 | glycerophosphoinositol transporter | |
| 3 | YCR099c | 301292 | 300828 | 155 | 62.02 | 2.20 | 2.91 | 2.09 | 1.60 | 0.90 | 0.61 | 2 | 2 | 1 | strong similarity to Pep1p, VTH1p and VTH22p | |
| 3 | YCR100c | 302214 | 301267 | 316 | 65.14 | -65.56 | 2.54 | 2.04 | 1.36 | 0.94 | 0.60 | 2 | 2 | 2 | strong similarity to Pep1p, VTH1p and VTH22p | |
| 3 | YCR101c | 303023 | 302478 | 182 | 57.80 | -98.13 | 2.37 | 0.52 | 2.10 | 0.82 | 0.56 | 2 | 2 | 1 | strong similarity to Pep1p, VTH1p and VTH22p | |
| 3 | YCR102c | 305460 | 304357 | 368 | 64.83 | -64.80 | 4.78 | 1.96 | 0.96 | 0.97 | 0.74 | 3 | 1 | 5 | similarity to C.carbonum toxD gene | |
| 3 | YCR102w-a | 306728 | 306922 | 65 | 130.60 | 75.96 | 1.14 | 0.51 | 4.86 | 0.18 | 0.36 | 4 | 3 | 0 | very hypoth. | similarity to other hypothetical yeast proteins |
| 3 | YCR104w | 307794 | 308165 | 124 | 71.57 | -103.24 | 3.12 | 3.14 | 1.68 | 0.89 | 0.79 | 2 | 3 | 0 | strong similarity to members of the Srp1/Tip1p family | |
| 3 | YCR105w | 309063 | 310145 | 361 | 68.20 | 77.47 | 4.25 | 0.49 | 3.32 | 0.53 | 0.63 | 2 | 1 | 8 | strong similarity to alcohol dehydrogenases | |
| 3 | YCR106w | 310951 | 313446 | 832 | 56.50 | -52.43 | 2.95 | 1.14 | 1.32 | 0.94 | 0.54 | 3 | 2 | 1 | similarity to transcription factor | |
| 3 | YCR107w | 313883 | 314971 | 363 | 59.64 | -20.56 | 4.26 | 1.35 | 1.23 | 0.95 | 0.65 | 2 | 1 | 1 | strong similarity aryl-alcohol reductases of P. chrysosporium |