Correspondence between mutation and selection pressure and the genetic code degeneracy in the gene evolution.
M. Dudkiewicz, P. Mackiewicz, A. Nowicka, M. Kowalczuk, D. Mackiewicz, N. Polak, K. Smolarczyk, J. Banaszak, M.R. Dudek, S. Cebrat (2005)
Future Generation Computer Systems 21: 1033-1039

Characterization of a membrane-linked Ser/Thr protein kinase in Bacillus subtilis, implicated in developmental processes
E. Madec, A Łaszkiewicz, A. Iwanicki, M. Obuchowski, S. Seror, 2002,
Mol. Microb., 2, 571-586

Using Monte Carlo simulations for the gene and genome evolution.
M. Kowalczuk, A. Łaszkiewicz, M. Dudkiewicz, P. Mackiewicz, D. Mackiewicz, N. Polak, K. Smolarczyk, J. Banaszak, M. R. Dudek, S. Cebrat (2004),
Trends in Statistical Physics 4: 29-44

Genomika-dziedzina wiedzy XXI wieku
P. Mackiewicz, J. Zakrzewska-Czerwińska, S. Cebrat (2005),
Biotechnologia 3(70): 7-21

Od sekwencji do funkcji - poszukiwanie genów i ich adnotacje.
K. Bączkowski, P. Mackiewicz, M. Kowalczuk, J. Banaszak, S. Cebrat (2005),
Biotechnologia 3(70): 22-44

Zagadka sierocych otwartych ramek odczytu (ORF-anów).
P. Mackiewicz, K. Bączkowski, M. Sobczyński, S. Cebrat (2005),
Biotechnologia 3(70): 45-56

Wpływ replikacji na organizację i ewolucję genomów bakterii.
M. Kowalczuk, D. Mackiewicz, P. Mackiewicz, N. Polak, S. Cebrat (2005),
Biotechnologia 3(70): 75-90

Wyznaczenie miejsca inicjacji replikacji na podstawie sekwencji chromosomu bakteryjnego.
J. Zakrzewska-Czerwińska, P. Mackiewicz, A. Zawilak, S. Cebrat (2005),
Biotechnologia 3(70): 91-101

Nowe spojrzenie na filogenezę z punktu widzenia genomiki.
M. Sobczyński, P. Mackiewicz, D. Mackiewicz, K. Smolarczyk, S. Cebrat (2005),
Biotechnologia, 3(70): 102-117

Copy number of bean mitochondrial genes estimated by real-time PCR 3 does not correlate with the number of gene loci and transcript levels.
M. Wołoszynska, B. Kmieć, P. Mackiewicz, H. Jańska (2006),
Plant Molecular Biology, 61(1-2): 1-12

Mutational and selective mechanisms shaping large-scale organization and evolution of chromosomes.
M. Kowalczuk, D. Mackiewicz, P. Mackiewicz, N. Polak, K. Smolarczyk, J. Banaszak, M. R. Dudek, S. Cebrat (2006),
Current Topics in Genetics.

Organisation and diversity of the targeting signals of proteins imported into plastids with three envelope membranes.
P.Mackiewicz, A.BodyÂł, 2005,
The International Conference Sequence-Structure-Function Relationships; Theoretical and Experimental Approaches, Warsaw – Poland, April 6-10 2005; ABSTRACTS, p. 26.

Relation between amino acid frequencies and their relative substitution rates under mutation pressure and selection pressure.
D.Mackiewicz, A.Nowicka, P.Mackiewicz, M.Kowalczuk, J.Banaszak, S.Cebrat, M.R.Dudek, 2005,
The International Conference Sequence-Structure-Function Relationships; Theoretical and Experimental Approaches, Warsaw – Poland, April 6-10 2005; ABSTRACTS, p. 25 .

Non-random distribution of genes of different length on prokaryotic chromosomes.
M.SobczyĂąski, K.BÂączkowski, P.Mackiewicz, S.Cebrat, 2005,
The International Conference Sequence-Structure-Function Relationships; Theoretical and Experimental Approaches, Warsaw – Poland, April 6-10 2005; ABSTRACTS, p. 37.

Altruism and antagonistic pleiotropy in Penna ageing model.
S.Cebrat, D.Stauffer, 2005,
Theory in Biosciences, 123, 235-241.

Monte Carlo Simulations of the Age Structure of the Human Population.
A.?aszkiewicz, S.Cebrat, 2005,
J. Insurance Medicine 37(1) (in the press).

Scaling effects in the Penna ageing model.
A.?aszkiewicz, S.Cebrat, D.Stauffer, 2005,
Adv. Complex Systems, (in the press).

Higher mutation rate helps to rescue genes from the elimination by selection.
M.Dudkiewicz, P.Mackiewicz, D.Mackiewicz, M.Kowalczuk, A.Nowicka, N.Polak, K.Smolarczyk, J.Banaszak, M.R.Dudek, S.Cebrat, 2005,
Biosystems, 80, 192-199.[PDF]

Differential Gene Survival under Asymmetric Directional Mutational Pressure.
P.Mackiewicz, M.Dudkiewicz, M.Kowalczuk, D.Mackiewicz, J.Banaszak, N.Polak, K.Smolarczyk, A.Nowicka, M.R.Dudek, S.Cebrat, 2004,
Computational Science – ICCS 2004, KrakĂłw, June 6-9, 2004, M. Bubak et al. (Eds.): Lecture Notes in Computer Science, 3039, 687-693.[PDF], extended version - [PDF]

How Gene Survival Depends on Their Length.
N.Polak, J.Banaszak, P.Mackiewicz, M.Dudkiewicz, M.Kowalczuk, D.Mackiewicz, K.Smolarczyk, A.Nowicka, M.R.Dudek, S.Cebrat, 2004,
Computational Science – ICCS 2004, KrakĂłw, June 6-9, 2004, M. Bubak et al. (Eds.): Lecture Notes in Computer Science, 3039, 694-699.[PDF], extended version - [PDF]

Genetic Paralog Analysis and Simulations.
S.Cebrat, J.P.Radomski, D.Stauffer, 2004,
Computational Science – ICCS 2004, KrakĂłw, June 6-9, 2004, M. Bubak et al. (Eds.): Lecture Notes in Computer Science, 3039, 709-717.[PDF]

The Role of Dominant Mutations in the Population Expansion.
S.Cebrat, A.PĂŞkalski, 2004,
Computational Science – ICCS 2004, KrakĂłw, June 6-9, 2004, M. Bubak et al. (Eds.): Lecture Notes in Computer Science, 3039, 765-770.[PDF]

The fragment of the chloroplast DNA was acquired by bean mitochondrial genome by horizontal DNA transfer.
T.Bocer, M.Wo?oszy?ska, P.Mackiewicz, H.Ja?ska, 2004,
The 29th Meeting of the Federation of the Biochemical Societies, Warsaw, 26 June – 1 July 2004, EJB, The FEBS Journal, 271 (suppl. 1), 213.

ReguÂły wyznaczania regionu inicjacji replikacji w genomach bakteryjnych.
P.Mackiewicz, J.Zakrzewska-Czerwi?ska, A.Zawilak, M.R.Dudek, S.Cebrat, 2004,
Polski Kongres Genetyki, XV Zjazd Polskiego Towarzystwa Genetycznego, IV Zjazd Polskiego Towarzystwa Genetyki CzÂłowieka, GdaĂąsk 6-9 wrzeÂśnia 2004 r., Streszczenia: 189-190.

Zale¿nonoœÌ stabilnoœci genów od ich dlugoœci.
N.Polak, P.Mackiewicz, J.Banaszak, M.Dudkiewicz, M.Kowalczuk, D.Mackiewicz, K.Smolarczyk, M.R.Dudek, S.Cebrat, 2004,
Polski Kongres Genetyki, XV Zjazd Polskiego Towarzystwa Genetycznego, IV Zjazd Polskiego Towarzystwa Genetyki CzÂłowieka, GdaĂąsk 6-9 wrzeÂśnia 2004 r., Streszczenia: 205-206.

Ewolucja genĂłw w asymetrycznych genomach bakteryjnych.
K.Smolarczyk, P.Mackiewicz, N.Polak, J.Banaszak, M.Dudkiewicz, M.Kowalczuk, D.Mackiewicz, M.R.Dudek, S.Cebrat, 2004,
Polski Kongres Genetyki, XV Zjazd Polskiego Towarzystwa Genetycznego, IV Zjazd Polskiego Towarzystwa Genetyki CzÂłowieka, GdaĂąsk 6-9 wrzeÂśnia 2004 r., Streszczenia: 206.

Punkt izoelektryczny biaÂłek – analizy proteomĂłw i symulacje komputerowe.
J.Banaszak, P.Mackiewicz, N.Polak, M.Kowalczuk, D.Mackiewicz, K.Smolarczyk, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2004,
Polski Kongres Genetyki, XV Zjazd Polskiego Towarzystwa Genetycznego, IV Zjazd Polskiego Towarzystwa Genetyki CzÂłowieka, GdaĂąsk 6-9 wrzeÂśnia 2004 r., Streszczenia: 206-207.

Poszukiwanie sekwencji kodujÂących wÂśrĂłd krĂłtkich ORFĂłw w genomie droÂżdzy Saccharomyces cerevisiae.
K.BÂączkowski, P.Mackiewicz, M.Kowalczuk, M.R.Dudek, S.Cebrat, 2004,
Polski Kongres Genetyki, XV Zjazd Polskiego Towarzystwa Genetycznego, IV Zjazd Polskiego Towarzystwa Genetyki CzÂłowieka, GdaĂąsk 6-9 wrzeÂśnia 2004 r., Streszczenia: 207.

A fragment of chloroplast DNA was transferred horizontally from magnoliids to mitochondrial genome of Phaseolus.
M.Wo?oszy?ska, T.Bocer, P.Mackiewicz, H.Ja?ska, 2004,
Gordon Research Conference Mitochondria & Chloroplasts, Kimball Union Academy Meriden, NH USA, July 25-30 2004.

Probabilistic PCA and neural networks in search of representative features for some yeast genome data.
A.Bartkowiak, S.Cebrat, P.Mackiewicz, 2004,
In: T. BurczyĂąski, W. Cholewa, W. Moczulski (editors), Methods of artificial intelligence. Proceedings Of The Symposium On Methods Of Artificial Intelligence AI-Meth 2004 and The Workshop On Knowledge Acquisition In Mechanical Engineering, 17-19 November, Gliwice, Poland, pp.17-18.[PDF]

Gene evolution under directional, asymmetric mutational pressure.
S.Cebrat, 2004,
Workshop Application of Genomics and Bioinformatics in Animal Biotechnology, Sucha Beskidzka, 3 luty 2004.

Monte Carlo simulations of genes, genome and populations evolution.
S.Cebrat, 2004,
Nyborg, Dania, kwiecieĂą 2004. I Conference of COST Action P10 – Physics of Risk.

Concert of the mutational and selection pressure on the genetic code.
S.Cebrat, 2004,
Computational and Mathematical Population Dynamics 7 Destobio 3, 21-25.06 Trento, WÂłochy.

Selection pressure on isoelectric point of proteins.
J.Banaszak, 2004,
PaŸdzidziernik 2004 Herbstseminar in Chøibskå "Bioinformatics and Biochemistry".

Simulation and analyses of the gene sequence divergence.
D.Mackiewicz, N.Polak, 2004,
PaŸdziernik 2004 Herbstseminar in Chøibskå "Bioinformatics and Biochemistry".

Introns, gamete preselection and two meiotic divisions in sex reproduction.
S.Cebrat, 2004,
PaŸdziernik 2004 Herbstseminar in Chøibskå "Bioinformatics and Biochemistry".

The Role of Dominant Mutations in the Population Expansion.
S.Cebrat, A.PĂŞkalski, 2004,
Lecture Notes in Computer Science, 3039, 765-770.[PDF]

Effect of Variable Surrounding on Species Creation.
A.Nowicka, A.Duda, M.R.Dudek, 2004,
C.R. Biologies 327, 283-292.

Simulation of gene evolution under directional mutational pressure.
M.Dudkiewicz, P.Mackiewicz, M.Kowalczuk, D.Mackiewicz, A.Nowicka, N.Polak, K.Smolarczyk, J.Banaszak, M.R.Dudek, S.Cebrat, 2004,
Physica A, 336 (1-2), 63-73.[PDF]

Representation of mutation pressure and selection pressure by PAM matrices.
A.Nowicka, P.Mackiewicz, M.Dudkiewicz, D.Mackiewicz, M.Kowalczuk, J.Banaszak, S.Cebrat, M.R.Dudek, 2004,
Applied Bioinformatics, 3 (1), 31-39.[PDF]

Differential Gene Survival under Asymmetric Directional Mutational Pressure.
P.Mackiewicz, M.Dudkiewicz, M.Kowalczuk, D.Mackiewicz, J.Banaszak, N.Polak, K.Smolarczyk, A.Nowicka, M.R.Dudek, S.Cebrat, 2004,
Lecture Notes in Computer Science, 3039, 687-693.[PDF], extended version - [PDF]

How Gene Survival Depends on Their Length.
N.Polak, J.Banaszak, P.Mackiewicz, M.Dudkiewicz, M.Kowalczuk, D.Mackiewicz, K.Smolarczyk, A.Nowicka, M.R.Dudek, S.Cebrat, 2004,
Lecture Notes in Computer Science, 3039, 694-699.[PDF], extended version - [PDF]

Genetic Paralog Analysis and Simulations.
S.Cebrat, J.P.Radomski, D.Stauffer, 2004,
Lecture Notes in Computer Science, 3039, 709-717.[PDF]

Where does bacterial replication start? Rules for predicting the oriC region.
P.Mackiewicz, J.Zakrzewska-Czerwi?ska, A.Zawilak, M.R.Dudek, S.Cebrat, 2004,
Nucl. Acids. Res., 32, 3781-3791.[PDF]

Correspondence between mutation and selection pressure and the genetic code degeneracy in the gene evolution.
M.Dudkiewicz, P.Mackiewicz, A.Nowicka, M.Kowalczuk, D.Mackiewicz, N.Polak, K.Smolarczyk, J.Banaszak, M.R.Dudek, S.Cebrat, 2004,
FGCS (in the press)

A fragment of chloroplast DNA was transferred horizontally, probably from non-eudicots, to mitochondrial genome of Phaseolus.
M.Wo?oszy?ska, T.Bocer, P.Mackiewicz, H.Ja?ska, 2004,
Plant Molecular Biology, 56, 811–820.[PDF]

Modelowanie presji mutacyjnej i selekcyjnej w genomie prokariotycznym.
M.Dudkiewicz, 2004,
PhD dissertation, 1 - 100, Wroclaw.[PDF]

Probabilistic PCA and neural networks in search of representative features for some yeast genome data.
A.Bartkowiak, S.Cebrat, P.Mackiewicz, 2004,
In: T. BurczyĂąski, W. Cholewa, W. Moczulski (editors), Recent developments in artificial intelligence methods. AI-METH Series on Artificial Intelligence Methods, Gliwice, 2004, 21-26.[PDF]

Properties of Genetic Code under Directional, Asymmetric Mutational Pressure.
M.Dudkiewicz, P.Mackiewicz, A.Nowicka, M.Kowalczuk, D.Mackiewicz, N.Polak, K.Smolarczyk, M.R.Dudek, S.Cebrat, 2003,
Computational Science – ICCS 2003, Melbourne and St. Petersburg, June 2-4, 2003, P. M. A. Sloot et al. (Eds.): Lecture Notes in Computer Science, 2657, 343-350.

Correlation between mutation pressure, selection pressure and occurrence of amino acids.
A.Nowicka, P.Mackiewicz, M.Dudkiewicz, D.Mackiewicz, M.Kowalczuk, S.Cebrat, M.R.Dudek, 2003,
Computational Science – ICCS 2003, Melbourne and St. Petersburg, June 2-4, 2003, P. M. A. Sloot et al. (Eds.): Lecture Notes in Computer Science, 2658, 650-657.

Gene inversions and rate of their divergence.
P.Mackiewicz, D.Mackiewicz, A.Nowicka, K.Smolarczyk, A.?aszkiewicz, 2003,
XIX International Congress of Genetics, Melbourne, July 6-11, 2003. Book of abstracts: 24

Asymmetric mutational pressure associated with replication and strategy of gene evolution.
M.Kowalczuk, M.Dudkiewicz, N.Polak, M.R.Dudek, S.Cebrat, 2003,
XIX International Congress of Genetics, Melbourne, July 6-11, 2003. Book of abstracts: 138.

Evolution of protein coding sequences under directional mutational pressure.
M.Dudkiewicz, P.Mackiewicz, A.Nowicka, M.Kowalczuk, D.Mackiewicz, N.Polak, K.Smolarczyk, J.Banaszak, M.R.Dudek, S.Cebrat, 2003,
The XVII Max Born Symposium, LÂądek ZdrĂłj, September 22-25, 2003. Book of abstracts: 14.

Kohonen's self-organizing maps in visualizing of some yeast DNA data.
A.Bartkowiak, A.Szustalewicz, S.Cebrat, P.Mackiewicz, 2003,
LX Scientific Session of the Polish Biometric Society, PoznaĂą, 5 December 2003, Listy Biometryczne – Biometrical Letters, 40 (2), 85.

Speciation Effect in the Penna Ageing Model.
A.?aszkiewicz, Sz.Szymczak, S.Cebrat, 2003,
Int. J. Modern Phys. C, 14 (6), 765-774.

Prediction of the human life expectancy.
A.?aszkiewicz, Sz.Szymczak, S.Cebrat, 2003,
Theory Biosci., 122, 313-320.

The Oldest Old and the Population Heterogeneity.
A.?aszkiewicz, Sz.Szymczak, S.Cebrat, 2003,
Int. J. Modern Phys. C, 14 (10), 1355-1362.

Properties of Genetic Code under Directional, Asymmetric Mutational Pressure.
M.Dudkiewicz, P.Mackiewicz, A.Nowicka, M.Kowalczuk, D.Mackiewicz, N.Polak, K.Smolarczyk, M.R.Dudek, S.Cebrat, 2003,
Lecture Notes in Computer Science, 2657, 343-350.

Correlation between mutation pressure, selection pressure, and occurrence of amino acids.
A.Nowicka, P.Mackiewicz, M.Dudkiewicz, D.Mackiewicz, M.Kowalczuk, S.Cebrat, M.R.Dudek, 2003,
Lecture Notes in Computer Science, 2658, 650-657.

Rearrangements between Differently Replicating DNA strands in Asymmetric Bacterial Genomes.
D.Mackiewicz, P.Mackiewicz, M.Kowalczuk, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2003,
Acta Microbiologica Polonica, 52 (3), 245-261.

High divergence rate of sequences located on different DNA strands in closely related bacterial genomes.
P.Mackiewicz, D.Mackiewicz, M.Kowalczuk, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2003,
Journal of Applied Genetics, 44 (4), 561-584.[PDF]

Genetic information, acquisiton, access and control, (book review).
S.Cebrat, 2003,
J.Biol.Sci.35, 154-155.

Czy genomika wyewoluowaÂła z ekonomii?
S.Cebrat, 2003,
WrocÂławski Biuletyn Gospodarczy 30, 14-18.

Kohonen's self-organizing maps as applied to graphical visualization of some yeast DNA data.
A.Bartkowiak, A.Szustalewicz, S.Cebrat, P.Mackiewicz, 2003,
Listy Biometryczne – Biometrical Letters, 40 (2), 37-56.

The role of intergenic sequences in the genomes of sexually reproducing organisms.
S.Cebrat, M.Kowalczuk, P.Mackiewicz, D.Mackiewicz, 2002,
Polish-Japanese Bilateral Seminar on Bioinformatics, 24-25 czerwca, PoznaĂą, 2002.

Przewidywanie zmian struktury wiekowej populacji w modelu Penna.
S.Cebrat, Sz.Szymczak, A.?aszkiewicz, 2002,
XXXI OgĂłlnopolska Konferencja ZastosowaĂą Matematyki, Zakopane, 17 - 24 wrzeÂśnia 2002.

Aproksymowanie liczby genĂłw w genomach prokariotycznych.
S.Cebrat, P.Mackiewicz, D.Mackiewicz, M.Kowalczuk, 2002,
OgĂłlnopolska Konferencja nt. ZastosowaĂą Matematyki, Zakopane, 17 - 24 wrzeÂśnia 2002.

Prediction of the Human Life Expectancy.
S.Cebrat, Sz.Szymczak, A.?aszkiewicz, 2002,
International Workshop on Complex Systems in Natural and Social Sciences, Matrafured, WĂŞgry, 26 – 29 wrzesieĂą 2002.

From mutational pressure to structure of genomes.
M.Kowalczuk, P.Mackiewicz, D.Szczepanik, A.Nowicka, M.Dudkiewicz, A.?aszkiewicz, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 197-198.

Ocena modeli ewolucji sekwencji nukleotydowych do okreÂślania odlegÂłoÂści miĂŞdzy sekwencjami.
P.Mackiewicz, A.?aszkiewicz, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 209-210.

Tworzenie tablic mutacji dla genomĂłw prokariotycznych.
M.Kowalczuk, P.Mackiewicz, N.Polak, A.Nowicka, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 210.

Testowanie tablic mutacji dla genomĂłw prokariotycznych.
M.Kowalczuk, P.Mackiewicz, K.Smolarczyk, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 210-211.

Przyczyny ró¿nic w tempie dywergencji genów bakterii.
P.Mackiewicz, D.Mackiewicz, M.Kowalczuk, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 211.

WpÂływ historii genĂłw na strukturĂŞ drzew filogenetycznych.
D.Mackiewicz, P.Mackiewicz, A.Nowicka, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 212.

Tempo translokacji genĂłw miĂŞdzy niĂŚmi DNA.
D.Mackiewicz, P.Mackiewicz, M.Kowalczuk, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 212.

Symetria procesĂłw rekombinacyjnych w genomach prokariotycznych.
P.Mackiewicz, D.Mackiewicz, M.Kowalczuk, J.Banaszak, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 213.

KodujÂące wÂłaÂściwoÂści genomu droÂżdÂży Saccharomyces cerevisiae.
P.Mackiewicz, M.Kowalczuk, D.Mackiewicz, M.R.Dudek, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 213.

Redundancja informacji w genomach.
D.Stauffer, M.Dudkiewicz, S.Cebrat, 2002,
XXXVIII Zjazd Polskiego Towarzystwa Biochemicznego, WrocÂław, 18-22 wrzeÂśnia, 2002; Streszczenia, str. 214.

Geneza paralogĂłw w genomach haploidalnych.
D.Stauffer, M.Dudkiewicz, S.Cebrat, 2002,
Konferencja naukowa ”Biotechnologia w Polsce”, GdaĂąsk, 25-28 wrzeÂśnia, 2002.

Presja mutacyjna w genomach prokariotycznych.
M.Kowalczuk, P.Mackiewicz, N.Polak, K.Smolarczyk, M.R.Dudek, S.Cebrat, 2002,
Konferencja naukowa ”Biotechnologia w Polsce”, GdaĂąsk, 25-28 wrzeÂśnia, 2002.

Rearan¿acje pomiêdzy nici¹ wiod¹c¹ i opóŸniaj¹c¹ w genomach bakteryjnych.
D.Mackiewicz, P.Mackiewicz, M.Kowalczuk, M.R.Dudek, S.Cebrat, 2002,
Konferencja naukowa ”Biotechnologia w Polsce”, GdaĂąsk, 25-28 wrzeÂśnia, 2002.

Wysokie tempo dywergencji blisko spokrewnionych genomĂłw bakterii.
P.Mackiewicz, D.Mackiewicz, M.R.Dudek, S.Cebrat, 2002,
Konferencja naukowa ”Biotechnologia w Polsce”, GdaĂąsk, 25-28 wrzeÂśnia, 2002.

Jak przy³apaÌ staroœÌ na gor¹cym uczynku, czyli symulacje Monte Carlo dynamiki populacji.
A.?aszkiewicz, Sz.Szymczak, S.Cebrat, 2002,
Konferencja naukowa ”Biotechnologia w Polsce”, GdaĂąsk, 25-28 wrzeÂśnia, 2002.

WpÂływ zmiennych warunkĂłw Âśrodowiska na strukturĂŞ genetycznÂą gatunkĂłw.
A.Nowicka, M.R.Dudek, 2002,
Konferencja naukowa ”Biotechnologia w Polsce”, GdaĂąsk, 25-28 wrzeÂśnia, 2002.

Visualization of coding and not-coding pieces of DNA using vector quantization and self organizing maps.
A.Bartkowiak, A.Szustalewicz, S.Cebrat, P.Mackiewicz, 2002,
Proceedings of the XXIth International Biometric Conference, Freiburg, Germany, 171-172.

Higher mortality of the youngest organisms predicted by the Penna ageing model.
A.?aszkiewicz, Sz.Szymczak, S.Cebrat, 2002,
Conference on Mathematical Modelling of Population Dynamics, BĂŞdlewo, 24-28 czerwca, 2002.

Speciation effect in the Penna model.
A.?aszkiewicz, Sz.Szymczak, S.Cebrat, 2002,
Conference on Mathematical Modelling of Population Dynamics, BĂŞdlewo, 24-28 czerwca, 2002.

Effect of variable surrounding on species creation.
A.Nowicka, A.Duda, M.R.Dudek, 2002,
Conference on Mathematical Modelling of Population Dynamics, BĂŞdlewo, 24-28 czerwca, 2002.

Approximation of the coding capacity of genomes.
2002,
Partners in Project FP6. Final programme and abstracts. November 2002, Aalborg, Denmark; Abstract Bio 002, pp. 32-33.

Prediction of the human life expectancy.
2002,
Partners in Project FP6. Final programme and abstracts. November 2002, Aalborg, Denmark; Abstract IST 002, pp. 58-59.

The role of intergenic sequences in the genomes of sexually reproducing organisms.
S.Cebrat, M.Kowalczuk, P.Mackiewicz, D.Mackiewicz, 2002,
Polish-Japanese Bilateral Seminar on Bioinformatics, 24-25 czerwca, PoznaĂą, 2002.

Aproksymowanie liczby genĂłw w genomach prokariotycznych.
S.Cebrat, P.Mackiewicz, D.Mackiewicz, M.Kowalczuk, 2002,
OgĂłlnopolska Konferencja nt. ZastosowaĂą Matematyki, Zakopane, 17 - 24 wrzeÂśnia 2002.

Higher mortality of the youngest organisms predicted by the Penna aging model.
A.?aszkiewicz, E.Niewczas, Sz.Szymczak, A.Kurdziel, S.Cebrat, 2002,
Int. J. Modern Phys. C, 13, 967 - 975. Int. J. Modern Phys. C, 13 (7), 967 – 973.

Replication associated mutational pressure generating long-range correlation in DNA.
P.Mackiewicz, M.Kowalczuk, D.Mackiewicz, A.Nowicka, M.Dudkiewicz, A.?aszkiewicz, M.R.Dudek, S.Cebrat, 2002,
Physica A: Statistical Mechanics and its Applications, 314 (1-4), 646-654.[PDF]

Monte Carlo simulation of genome viability with paralogs replacement.
S.Cebrat, D.Stauffer, 2002,
J. Appl. Genet. 43, 391– 395.

Mutational and selection pressures in the Borrelia burgdorferi genome.
M.Kowalczuk, 2002,
PhD dissertation, 1 - 76, Wroclaw.[PDF]

How many protein-coding genes are there in the Saccharomyces cerevisiae genome?
P.Mackiewicz, M.Kowalczuk, D.Mackiewicz, A.Nowicka, M.Dudkiewicz, A.?aszkiewicz, M.R.Dudek, S.Cebrat, 2002,
Yeast 19(7), 619-629.

Zastosowanie proteomĂłw do badania odlegloÂści filogenetycznej miĂŞdzy bakteriami.
M.Dudkiewicz, P.Mackiewicz, D.Szczepanik, M.R.Dudek, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 103.

Rola sprzĂŞÂżeĂą genetycznych w komputerowo symulowanych populacjach.
A.Kurdziel, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 62.

Zró¿nicowane tempo zabijania genów w zale¿noœci od ich po³o¿enia na chromosomie.
P.Mackiewicz, D.Szczepanik, A.Nowicka, N.Polak, M.R.Dudek, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 112.

Presja mutacyjna w genomie Borrelia burgdorferi.
A.Nowicka, M.Kowalczuk, P.Mackiewicz, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 114.

Zró¿nicowane tempo ewolucji genów w genomach bakteryjnych.
D.Szczepanik, P.Mackiewicz, M.Kowalczuk, K.Smolarczyk, M.R.Dudek, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 118

Precyzyjne prawo ewolucji genomĂłw.
M.Kowalczuk, P.Mackiewicz, M.R.Dudek, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 60.

ORFy krĂłtsze niÂż 100 kodonĂłw w genomie Saccharomyces cerevisiae.
M.Kowalczuk, P.Mackiewicz, A.Nowicka, M.R.Dudek, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 107.

Szacowanie liczby genĂłw w genomach prokariotycznych.
P.Mackiewicz, D.Szczepanik, M.Kowalczuk, M.R.Dudek, S.Cebrat, 2001,
XIV Zjazd PTG, PoznaĂą, Streszczenia str. 112.

Number and coding probability of short ORFs in the Saccharomyces cerevisiae genome.
P.Mackiewicz, M.Kowalczuk, D.Szczepanik, M.R.Dudek, S.Cebrat, 2001,
20th International Conference on Yeast Genetics and Molecular Biology, Prague, Czech Republic, August 26 - 31, 2001, Yeast, 18, S106.

Replication Associated Mutational Pressure Generating Long Range Correlation in DNA.
P.Mackiewicz, M.Kowalczuk, A.Gierlik, D.Szczepanik, A.Nowicka, A.?aszkiewicz, M.R.Dudek, S.Cebrat, 2001,
Conference: “Horizons in Complex Systems”, Messina, December 5-9, 2001. Abstract: http://cmrg.apmaths.uwo.ca/~messina

Evolution rates of genes on leading and lagging DNA strands.
D.Szczepanik, P.Mackiewicz, M.Kowalczuk, A.Gierlik, A.Nowicka, M.R.Dudek, S.Cebrat, 2001,
J. Mol. Evol.52(5), 426-433.[PDF]

The differential killing of genes by inversions in prokaryotic genomes.
P.Mackiewicz, D.Szczepanik, A.Gierlik, M.Kowalczuk, A.Nowicka, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2001,
J. Mol. Evol. 53(6), 615-621.[PDF]

Identification of a putative chromosomal replication origin from Helicobacter pylori and its interaction with the initiator protein DnaA.
A.Zawilak, S.Cebrat, P.Mackiewicz, A.Król-Hulewicz, D.Jakimowicz, W.Messer, G.Go?ciniak, J.Zakrzewska-Czerwi?ska, 2001,
Nucleic Acids Res. 29(11), 2251-2259.[PDF]

DNA Asymmetry and the Replicational Mutational Pressure.
M.Kowalczuk, P.Mackiewicz, D.Mackiewicz, A.Nowicka, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2001,
J. Appl. Genet. 42(4), 553-577.[PDF]

Multiple base substitution corrections in DNA sequence evolution.
M.Kowalczuk, P.Mackiewicz, D.Mackiewicz, A.Nowicka, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2001,
Int. J. Modern Phys. C, 12(7), 1043-1053.

Flip-flop around the origin and terminus of replication in prokaryotic genomes.
P.Mackiewicz, D.Mackiewicz, M.Kowalczuk, S.Cebrat, 2001,
Genome Biology, 2(12): 1004.1-1004.4. http://genomebiology.com/2001/2/12/interactions/1004.1[PDF]

High correlation between the turnover of nucleotides under mutational pressure and the DNA composition.
M.Kowalczuk, P.Mackiewicz, D.Mackiewicz, A.Nowicka, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 2001,
BMC Evolutionary Biology, 1:13, http://www.biomedcentral.com/1471-2148/1/13[PDF]

No mystery of ORFans in Genomics - Generation of ORFans in the Antisense of Coding Sequences.
P.Mackiewicz, M.Kowalczuk, A.Gierlik, D.Szczepanik, A.Nowicka, M.R.Dudek, S.Cebrat, 2000,
Proceedings of the Second International Conference on Bioinformatics of Genome Regulation and Structure, Novosybirsk, 2000, vol.2, 38 - 41.[PDF]

Thousands of noncoding ORFs in the yeast genome.
M.Kowalczuk, P.Mackiewicz, A.Gierlik, D.Szczepanik, A.Nowicka, M.R.Dudek, S.Cebrat, 2000,
2000 Yeast Genetics and Molecular Biology Meeting, Seattle 2000, Book of Abstracts p 61.

Number of genes in prokaryotic genomes.
H.WrĂłblewska, P.Mackiewicz, A.Gierlik, A.Nowicka, M.R.Dudek, S.Cebrat, 2000,
The 24th Congress of the Polish Society of Microbiologists, BiaÂłystok, September 12-15, 2000, Med. Sci. Monit. 6, Suppl. 3, C/P-1, P110

One thousand genes less in the yeast genome?
P.Mackiewicz, D.Szczepanik, A.Gierlik, E.Stojek, M.R.Dudek, S.Cebrat, 2000,
The 24th Congress of the Polish Society of Microbiologists, BiaÂłystok, September 12-15, 2000, Med. Sci. Monit. 6, Suppl. 3, G/P-1, P151.

Application of proteomes for investigation of phylogenetic distance between bacteria.
M.Dudkiewicz, D.Szczepanik, P.Mackiewicz, M.Kowalczuk, E.Stojek, M.R.Dudek, S.Cebrat, 2000,
The 24th Congress of the Polish Society of Microbiologists, BiaÂłystok, September 12-15, 2000, Med. Sci. Monit. 6, Suppl. 3, G/P-2, P151.

Dependence of gene evolution rate on location on the chromosome in eubacteria.
D.Szczepanik, P.Mackiewicz, A.Gierlik, M.Kowalczuk, M.R.Dudek, S.Cebrat, 2000,
The 24th Congress of the Polish Society of Microbiologists, BiaÂłystok, September 12-15, 2000, Med. Sci. Monit. 6, Suppl. 3, G/P-3, P151.

Effect of selection pressure on the asymmetry of coding and non-coding sequences.
A.Gierlik, P.Mackiewicz, D.Szczepanik, M.Kowalczuk, A.Nowicka, M.R.Dudek, S.Cebrat, 2000,
The 24th Congress of the Polish Society of Microbiologists, BiaÂłystok, September 12-15, 2000, Med. Sci. Monit. 6, Suppl. 3, G/P-4, P152.

Simulation of asymmetric mutation pressure in Borrelia burgdorferi genome.
M.Kowalczuk, M.Dudkiewicz, A.Nowicka, P.Mackiewicz, M.R.Dudek, S.Cebrat, 2000,
The 24th Congress of the Polish Society of Microbiologists, BiaÂłystok, September 12-15, 2000, Med. Sci. Monit. 6, Suppl. 3, G/P-5, P152.

Asymmetry of the nucleotide composition of the leading and retarding strand.
A.Nowicka, A.Gierlik, P.Mackiewicz, M.Kowalczuk, M.R.Dudek, S.Cebrat, 2000,
The 24th Congress of the Polish Society of Microbiologists, BiaÂłystok, September 12-15, 2000, Med. Sci. Monit. 6, Suppl. 3, G/P-6, P152.

Housekeeping Genes and Death Genes in the Penna Ageing Model.
E.Niewczas, A.Kurdziel, S.Cebrat, 2000,
Int. J. Modern Phys. C. 11. No. 4. 775-784.

The influence of the Medical Care on the Human Life Expectancy in 20th Century and the Penna Ageing Model.
E.Niewczas, S.Cebrat, D.Stauffer, 2000,
Theory in Biosciences, 119, 122-131.

Random Deaths in a Computational model for age-structured populations.
J.S.SaMartins, S.Cebrat, 2000,
Theory in Biosciences.119, 156-165.

Effect of inherited genetic information on stochastic predator-prey model.
A.Duda, A.Nowicka, P.Dys, M.R.Dudek, 2000,
Int. J. Modern Phys. C. 11, 1527-1538.

Is There a Replication-Associated Mutational Pressure in the Saccharomyces cerevisae Genome?
A.Gierlik, M.Kowalczuk, P.Mackiewicz, M.R.Dudek, S.Cebrat, 2000,
J. Theor. Biol. 202 (4), 305-314.[PDF]

No mystery of ORFans in genomics - generation of ORFans in the antisense of coding sequences.
P.Mackiewicz, M.Kowalczuk, A.Gierlik, D.Szczepanik, A.Nowicka, P.Mackiewicz, S.Cebrat, 2000,
Proceedings of the Second International Conference on Bioinformatics of Genome Regulation and Structure, BGRS'2000, Novosybirsk, Russia, August 7-11, 2000, vol. 2, 38-41. [PDF]

Organizacja i ewolucja genomu droÂżdÂży Saccharomyces cerevisiae a problem sierocych otwartych ramek odczytu.
P.Mackiewicz, 2000,


Organizacja i ewolucja genomu droÂżdÂży Saccharomyces cerevisiae a problem sierocych otwartych ramek odczytu.
P.Mackiewicz, 2000,
PostĂŞpy Biochemii, 46(4), 291-298 (in Polish).

Long-tail feature of DNA words over- and under-representation in coding sequences.
A.Nowicka, M.R.Dudek, S.Cebrat, M.Kowalczuk, P.Mackiewicz, M.Dudkiewicz, D.Szczepanik, 2000,
Computational Methods in Science and Technology 6, 65-71.

Graphic representation of coding DNA sequences - spiders and cracknels.
P.Mackiewicz, A.Gierlik, M.Kowalczuk, D.CieÂślakiewicz, J.Borkowska, M.R.Dudek, S.Cebrat, 1999,
The 13th Max Born Symposium, WrocÂław, May 26-30, 1999

Correlation in coding sequences of different genomes.
A.Gierlik, M.Kowalczuk, P.Mackiewicz, H.WrĂłblewska, A.Nowicka, M.R.Dudek, S.Cebrat, 1999,
The 13th Max Born Symposium, WrocÂław, May 26-30, 1999

Distribution of coding sequences on the surface of torus.
A.Gierlik, M.Kowalczuk, P.Mackiewicz, D.Szczepanik, M.Dudkiewicz, M.R.Dudek, S.Cebrat, 1999,
The 13th Max Born Symposium, WrocÂław, May 26-30, 1999.

Asymmetry of coding sequences in Borrelia burgdorferi genome.
P.Mackiewicz, A.Gierlik, M.Kowalczuk, D.Szczepanik, E.Stojek, M.R.Dudek, S.Cebrat, 1999,
The 13th Max Born Symposium, WrocÂław, May 26-30, 1999.

Asymmetry of coding properties of prokaryotic chromosomes.
P.Mackiewicz, A.Gierlik, M.Kowalczuk, D.Szczepanik, E.Stojek, M.R.Dudek, S.Cebrat, 1999,
The 13th Max Born Symposium, WrocÂław, May 26-30, 1999.

Asymmetry of nucleotide composition of prokaryotic chromosomes.
M.Kowalczuk, P.Mackiewicz, A.Gierlik, D.Szczepanik, E.Stojek, M.R.Dudek, S.Cebrat, 1999,
The 13th Max Born Symposium, WrocÂław, May 26-30, 1999.

Logic structure of DNA coding sequences.
M.Dudkiewicz, P.Mackiewicz, A.Gierlik, M.Kowalczuk, A.Nowicka, M.R.Dudek, S.Cebrat, 1999,
The 13th Max Born Symposium, WrocÂław, May 26-30, 1999

How were noncoding ORFs generated in the yeast genome?
P.Mackiewicz, A.Gierlik, M.Kowalczuk, M.R.Dudek, S.Cebrat, 1999,
19th International Conference on Yeast Genetics and Molecular Biology, Rimini, Italy, May 25 - 30, 1999, Current Genetics, 35(3-4), 226.

Is there replication-associated mutational pressure in the Saccharomyces cerevisiae genome?
M.Kowalczuk, A.Gierlik, P.Mackiewicz, M.R.Dudek, S.Cebrat, 1999,
19th International Conference on Yeast Genetics and Molecular Biology, Rimini, Italy, May 25 - 30, 1999, Current Genetics, 35(3-4), 225.

Some statistical problems arising when investigating DNA sequences.
A.Bartkowiak, S.Cebrat, P.Mackiewicz, 1999,
Second European Conference on Highly Structured Stochastic Systems, Pavia, September 14-18, 1999, Book of Abstracts: 19-21.[PDF]

Model of population evolution with and without eugenics.
S.Cebrat, A.PĂŞkalski, 1999,
Eur. Phys. J. B 11 (4), 687-690.

Penna Ageing Model and Improvement of Medical Care in 20th Century.
Paulo Murilo deOliveira, Suzana Moss deOliveira, D.Stauffer, S.Cebrat, 1999,
Physica A, 273, 145 -149.[PDF]

Effect of replication on the third base of codons.
S.Cebrat, M.R.Dudek, A.Gierlik, M.Kowalczuk, P.Mackiewicz, 1999,
Physica A, 265(1-2), 78 – 84.(abstract), [PDF]

How does replication-associated mutational pressure influence amino acid composition of proteins?
P.Mackiewicz, A.Gierlik, M.Kowalczuk, M.R.Dudek, S.Cebrat, 1999,
Genome Research, 9(5), 409-416.(abstract), [PDF]

Asymmetry of nucleotide composition of prokaryotic chromosomes.
P.Mackiewicz, A.Gierlik, M.Kowalczuk, M.R.Dudek, S.Cebrat, 1999,
Journal of Applied Genetics, 40(1), 1-14.(abstract),

Mechanisms generating correlation in nucleotide composition in Borrelia burgdorferi genome.
P.Mackiewicz, A.Gierlik, M.Kowalczuk, D.Szczepanik, P.Mackiewicz, S.Cebrat, 1999,
Physica A, 273, 103 - 115.[PDF]

Optimization of Gene Sequences under Constant Mutational Pressure and Selection.
M.Kowalczuk, A.Gierlik, P.Mackiewicz, S.Cebrat, M.R.Dudek, 1999,
Physica A, 273, 116 - 131.[PDF]

Some hints on Open Reading Frame statistics - how ORF length depends on selection.
A.Gierlik, P.Mackiewicz, M.Kowalczuk, M.R.Dudek, S.Cebrat, 1999,
Int. J. Modern Phys. C, 10(4): 635-643. (abstract),

Total Number of Coding Open Reading Frames in the Yeast Genome.
M.Kowalczuk, P.Mackiewicz, A.Gierlik, P.Mackiewicz, S.Cebrat, 1999,
Yeast, 15, 1031-1034.(abstract), [PDF]

PeriodycznoœÌ w zdolnoœciach koduj¹cych DNA.
S.Cebrat, P.Mackiewicz, 1999,
w: Symetrie, systemy, ewolucja. (red. A. Nobis, A. OgorzaÂłek), Studium Generale, Tom VIII 1999, Wydawnictwo Uniwersytetu WrocÂławskiego, WrocÂław; (in Polish), 69-92 (abstract),

KodujÂące palindromy.
S.Cebrat, M.R.Dudek, P.Mackiewicz, 1999,
w: Symetrie, systemy, ewolucja. (red. A. Nobis, A. OgorzaÂłek), Studium Generale, Tom VIII 1999, Wydawnictwo Uniwersytetu WrocÂławskiego, WrocÂław; (in Polish), 93-114(abstract),

Origin and properties of noncoding ORFs in the yeast genome.
P.Mackiewicz, M.Kowalczuk, A.Gierlik, P.Mackiewicz, S.Cebrat, 1999,
Nucleic Acids Res., 27(17), 3503-3509. (abstract), [PDF]

Some statistical problems arising when investigating DNA sequences.
A.Bartkowiak, S.Cebrat, P.Mackiewicz, 1999,
Second European Conference on Highly Structured Stochastic Systems, Pavia, September 14-18, 1999, Book of Abstracts: 19-21. [PDF]

Why do women live longer than men? A Monte Carlo simulation of Penna models with X and Y chromosomes.
J.Schneider, S.Cebrat, D.Stauffer, 1998,
5th International Conference Mathematical Population Dynamics. Zakopane '98.

Using the effect of mutational pressure for mapping the origin and the terminus of replication of prokaryotic genomes.
M.Kowalczuk, A.Gierlik, P.Mackiewicz, S.Cebrat, 1998,
6th International Students’ Scientific Conference, GdaĂąsk '98. Book of Abstracts: 3.

How replication-associated mutational pressure affect coding and noncoding sequences?
A.Gierlik, A.Nowicka, S.Cebrat, 1998,
6th International Students’ Scientific Conference, GdaĂąsk '98. Book of Abstracts: 17.

Aminoacid composition of peptide depends on the location of gene on chromosome.
P.Mackiewicz, E.Stojek, D.Szczepanik, S.Cebrat, 1998,
6th International Students’ Scientific Conference, GdaĂąsk '98. Book of Abstracts: 16.

Types of nucleotide substitutions introduced by mutational pressure into coding and noncoding sequences.
A.Gierlik, J.Borkowska, D.CieÂślakiewicz, S.Cebrat, 1998,
6th International Students’ Scientific Conference, GdaĂąsk '98. Book of Abstracts: 18.

Statistical significance of the asymmetry introduced by mutational pressure.
P.Mackiewicz, M.R.Dudek, S.Cebrat, 1998,
6th International Students’ Scientific Conference, GdaĂąsk '98. Book of Abstracts: 17.

Mystery of Orphans revisited.
M.Fita, M.Kowalczuk, P.Mackiewicz, S.Cebrat, 1998,
6th International Students’ Scientific Conference, GdaĂąsk '98. Book of Abstracts: 18.

Thickness and structure of dental enamel in the selected recent and fossil species of mammals.
P.Mackiewicz, T.Wiszniowska, 1998,
6th International Students’ Scientific Conference, GdaĂąsk '98. Book of Abstracts: 34.

The number of protein coding ORFs in Saccharomyces cerevisiae genome.
M.Kowalczuk, P.Mackiewicz, M.R.Dudek, S.Cebrat, 1998,
XIII Zjazd Polskiego Towarzystwa Genetycznego, Warszawa 22 - 25 wrzesieĂą '98. J. Appl. Genet. 39A: 155.

How amino acid composition of proteins depends on location of their genes on chromosome?
P.Mackiewicz, A.Gierlik, M.Kowalczuk, M.R.Dudek, S.Cebrat, 1998,
XIII Zjazd Polskiego Towarzystwa Genetycznego, Warszawa 22 - 25 wrzesieĂą '98. J. Appl. Genet. 39A: 156.

Is transcription the main reason of asymmetry of DNA molecule?
A.Gierlik, P.Mackiewicz, M.Kowalczuk, M.R.Dudek, S.Cebrat, 1998,
XIII Zjazd Polskiego Towarzystwa Genetycznego, Warszawa 22 - 25 wrzesieĂą '98. J. Appl. Genet. 39A: 156.

Asymmetry of nucleotide composition of bacterial chromosomes.
S.Cebrat, A.Gierlik, P.Mackiewicz, M.Kowalczuk, M.R.Dudek, 1998,
XIII Zjazd Polskiego Towarzystwa Genetycznego, Warszawa 22 - 25 wrzesieĂą '98. J. Appl. Genet. 39A: 155.

Effect of replication on the third base of codons.
S.Cebrat, M.R.Dudek, A.Gierlik, M.Kowalczuk, P.Mackiewicz, 1998,
The 11th Marian Smoluchowski Symposium on Statistical Physics, Zakopane, Sept. 1-5, '98.

Penna Model From the Perspective of One Geneticist.
S.Cebrat, 1998,
Physica A, 258, 493-498.(abstract),

Why do women live longer than men? A Monte Carlo simulation of Penna models with X and Y chromosomes.
J.Schneider, S.Cebrat, D.Stauffer, 1998,
Int. J. Mod. Physics C, 9, 721 -725.(abstract),

The effect of DNA phase structure on DNA walks.
S.Cebrat, M.R.Dudek, 1998,
The European Physical Journal B, 3, 271 - 276.(abstract),

The role of the genetic code in generating new coding sequences inside existing genes.
S.Cebrat, P.Mackiewicz, M.R.Dudek, 1998,
Biosystems, 45(2), 165 - 176.(abstract), [PDF]

Sequence asymmetry as a parameter indicating coding sequence in Saccharomyces cerevisiae genome.
S.Cebrat, M.R.Dudek, P.Mackiewicz, 1998,
Theory in Biosciences, 117, 78 - 89.(abstract),

Compensation of coding trends in yeast genome.
S.Cebrat, M.R.Dudek, 1997,
Middle European Cooperation in Statistical Physics, Szklarska PorĂŞba, April '97.

The number of coding ORFs in Saccharomyces cerevisiae genome and the mystery of orphans.
S.Cebrat, M.R.Dudek, P.Mackiewicz, 1997,
18th Int. Conf. Yeast Genetics Mol. Biol. Stellenbosch, South Africa. Yeast, 13, S262, P189.

The asymmetry of the sense versus antisense strands of coding sequences in Saccharomyces cerevisiae genome.
M.Kowalczuk, M.Fita, P.Mackiewicz, S.Cebrat, 1997,
5th International Students’ Scientific Conference, GdaĂąsk '97. Book of Abstracts: 8.

Have genes generated new genes in antisense?
P.Mackiewicz, M.Kowalczuk, M.Fita, S.Cebrat, 1997,
5th International Students’ Scientific Conference, GdaĂąsk '97. Book of Abstracts: 34.

Estimation of the number of genes in the yeast genome - the explanation of the paradox of orphans.
M.Fita, M.Kowalczuk, P.Mackiewicz, S.Cebrat, 1997,
5th International Students’ Scientific Conference, GdaĂąsk '97. Book of Abstracts: 25.

The role of silent mutations in CpG sequences in the human p53 gene.
M.Cebrat, J.Kanczewska, S.Cebrat, 1997,
5th International Students’ Scientific Conference, GdaĂąsk '97. Book of Abstracts: 23.

Asymmetry of coding versus noncoding strands of protein coding sequences.
S.Cebrat, M.R.Dudek, P.Mackiewicz, M.Kowalczuk, M.Fita, 1997,
9th International Genome Sequencing and Analysis Conference, Sept. 13-16 '97, Hilton Head, USA.

The effect of social alliances on wolve population on their survival under hunting.
S.Cebrat, J.K?kol, 1997,
Int. J. Mod. Physics C, 8(2) 417 - 426.(abstract),

Asymmetry in nucleotide composition of sense and antisense strands as a parameter for discriminating open reading frames as protein coding sequences.
S.Cebrat, M.R.Dudek, A.Rogowska, 1997,
Journal of Applied Genetics, 38(1), 1-9. (abstract),

Asymmetry of coding versus non-coding strand in coding sequences of different genomes.
S.Cebrat, M.R.Dudek, P.Mackiewicz, A.Rogowska, M.Kowalczuk, 1997,
Microbial & Comparative Genomics. 2(4), 259 - 268.(abstract),

Is there any mystery of ORPHANs?
S.Cebrat, M.R.Dudek, P.Mackiewicz, 1997,
Journal of Applied Genetics, 38(4), 365 - 372. (abstract),

Symmetry in DNA domains of Yeast Chromosomes.
S.Cebrat, M.R.Dudek, 1996,
Virtual Poster for 8th Joint EPS-APS Int. Conference on Physics Computing '96, KrakĂłw.

Symmetry in chromosome fractal organization and DNA domain structure.
S.Cebrat, M.R.Dudek, 1996,
8th Joint EPS-APS Int.Conference on Physics Computing '96, KrakĂłw.

Symmetry in chromosome fractal organization and DNA domain structure.
S.Cebrat, M.R.Dudek, 1996,
preprint, Instytut Fizyki Teoretycznej, Uniwersytet WrocÂławski, 904/96.(abstract),

Generation of overlapping reading frames.
S.Cebrat, M.R.Dudek, 1996,
Trends in Genetics, 12, 12.[PDF]

Symmetry in chromosome fractal organization and DNA domain structure.
S.Cebrat, M.R.Dudek, 1996,
Proceedings of the 8th Joint EPS-APS Int. Conference on Physics Computing ‘96, eds. P. Borchards, M. Bubak, A. Maksymowicz (Academic Computer Center, CYFRONET-KRAKÓW), 371 -374. (abstract),

Klasyfikacja otwartych ramek odczytu.
S.Cebrat, M.R.Dudek, 1995,
XII Zjazd Polskiego Towarzystwa Genetycznego. Szczecin, 1995. J. Appl. Genet., 36A: 24.

Analiza korelacji dalekozasiĂŞgowych w sekwencjach chromosomĂłw droÂżdÂżowych.
S.Cebrat, M.R.Dudek, 1995,
XII Zjazd Polskiego Towarzystwa Genetycznego. Szczecin, 1995. J. Appl. Genet., 36A: 25.

Mutacje somatyczne w genie p53 cz?owieka.
S.Cebrat, ÂŁ.Maliszewska-Fiszer, 1995,
XII Zjazd Polskiego Towarzystwa Genetycznego. Szczecin, 1995. J. Appl. Genet., 36A: 153.

Coding rhythm of DNA strands.
S.Cebrat, M.R.Dudek, 1995,
preprint, Instytut Fizyki Teoretycznej, Uniwersytet WrocÂławski, 893/95.(abstract),

Stochastic DNA in the presence of the coding bias.
M.R.Dudek, S.Cebrat, 1995,
preprint, Instytut Fizyki Teoretycznej, Uniwersytet WrocÂławski, 897/95.(abstract),